PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00181.1.g00250.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 314aa    MW: 33516.2 Da    PI: 6.7501
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00181.1.g00250.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.3e-1869117355
                           AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  Zpz_sc00181.1.g00250.1.am.mk  69 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 117
                                   67******.**********965...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.54768125IPR001471AP2/ERF domain
CDDcd000182.80E-2668124No hitNo description
SMARTSM003807.5E-3068131IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.8E-2869125IPR001471AP2/ERF domain
SuperFamilySSF541713.27E-2069126IPR016177DNA-binding domain
PRINTSPR003671.1E-76980IPR001471AP2/ERF domain
PfamPF008472.4E-1171117IPR001471AP2/ERF domain
PRINTSPR003671.1E-791107IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MAIGREIMIV VPGFVWLARA KESKLLQPEK GVKEGRPTTG PSPHGLHVAL PSHPKCPSPS  60
PLPXXXXRFL GVRRRPWGRY AAEIRDPTTK ERHWLGTFDT AQEAALAYDR AALSMKGAQA  120
RTNFVYSHTA YNYPPFLAPF HAQPSYGYAQ SSMHQYGGQH GMGASSHIGS YHPHYQAPAG  180
SGASSASGEC SMPVAVDRTD GSLLDGGHNF LFSSADDNSG YLSSVVPESC LRPRSSAAAA  240
EDMRRYSDAD AYGMMGLRED VDDLAQMVAG FWGDAGDAEQ LGACAFPAGG GHGGDIVSSS  300
QGSDAYSPFS FLSH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-1769124662ATERF1
3gcc_A3e-1769124662ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0363659e-99BT036365.1 Zea mays full-length cDNA clone ZM_BFb0108M21 mRNA, complete cds.
GenBankKJ7275479e-99KJ727547.1 Zea mays clone pUT5407 AP2-EREBP transcription factor (EREB151) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004958652.11e-116PREDICTED: ethylene-responsive transcription factor ERF086
SwissprotQ6J9Q25e-40ERF86_ARATH; Ethylene-responsive transcription factor ERF086
TrEMBLK4A1M71e-116K4A1M7_SETIT; Uncharacterized protein
STRINGSi032771m1e-116(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP105252838
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.15e-40ERF family protein